54 rows · The accession assignment process is managed by prior agreement within the collaboration on which group will ‘own’ which accession prefix. This list of accession number prefixes should be used as a guide. There are cases where these assignments are not adhered to.
The format of a RefSeq sequence accession number is: [ two-letter alphabetical prefix ] [ _ ] [ series of digits ] [. ] [ version number] Some examples of Nucleotide sequence RefSeq accession numbers: NM_001744.6, NC_003619.1 , NG_009904.1, and NR_135858.1.
1/26/2021 · This subsection of the ‘Entry information’ section provides one or more accession number (s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number , which is called ‘Primary (citable) accession number ‘. … [A- NR -Z][0-9]([A-Z][A-Z0-9]{2}[0-9 …
If you access the Identical Protein report page from a conceptually translated INSDC CDS feature (e.g.
AAD28577.1) then you will see that accession number and record title at the top of the Identical protein report and the RefSeq accession and title (B) beneath that. C: The database source is indicated. This may be RefSeq, INSDC (conceptual …
These records use accession prefixes XM_, XR_, and XP_. Known RefSeq: RNA and protein products that are mainly derived from GenBank cDNA and EST data and are supported by the RefSeq eukaryotic curation group. These records use accession prefixes NM_, NR _, and NP_. Also see: Eukaryotic genome annotation pipeline Eukaryotic Annotation Schedule, About RefSeq – National Center for Biotechnology Information, Accession – UniProt, RefSeq non-redundant proteins, Accession – UniProt, Hi, is there anyone have downloaded GO annotation file which contains nr database protein accession number and its related GO term? each line of this file may contain both nr accession number and go term.
From @LujingF on November 17, 2017 7:16. Hi, I’m looking for an annotation file which contains nr database accession number and go term, but I cannot find it. I got the blastx result, so I wanna use the accession number to find its go term.
11/26/2016 · An accession number relates to an alphanumeric code printed on a biomedical label that is affixed to an aliquot in the laboratory to identify and match blood or urine specimens provided by donors. The accession number, and its corresponding clinical reference provided in the database system, restricts access to the lab clinician or physician specified on the label.
I have a list of protein accession IDs from the NCBI nr database that look like this: WP_0445013 WP_1884344 TBR13838. These are all bacterial proteins from a range of different bacteria, and I’ve made a phylogenetic tree based on these proteins.
